| President | Yoshikazu Ugawa | Department of Human Neurophysiology, Fukushima Medical University School of Medicine |
| Tetsuya Matsuda | Brain Science Institute, Tamagawa University (President of the 27th Annual Meeting in 2025) | |
| Executive Director for General Affairs | Masato Yumoto | Brain Function Analysis and Imaging Laboratory, Center for Information and Neural Networks, National Institute of Information and Communications Technology |
| Executive Director for Finance | Takashi Hanakawa | Graduate School of Medicine, Kyoto University |
| Directors | Shigeki Aoki | Department of Radiology, Juntendo University Graduate School of Medicine |
| Kensuke Kawai | Department of Neurosurgery, Jichi Medical University | |
| Hiromasa Takemura | National Institute for Physiological Sciences, National Institutes of Natural Sciences | |
| Takuya Hayashi | Biosystems Dinamics Research Center, RIKEN (President of the 28th Annual Meeting in 2026) | |
| Satoshi Maesawa | National Hospital Organization Nagoya Medical Center | |
| Madoka Matsumoto | Research Center, Graduate School of Medicine, Kyoto University | |
| Auditors | Norihiro Sadato | National Institute for Physiological Sciences, National Institutes of Natural Sciences |
| Hidenao Fukuyama | Center for the Promotion of Interdisciplinary Education and Research, Kyoto University | |
| Eiju Watanabe | Professor Emeritus, Jichi Medical University | |
| President of the Annual Meeting | Masayuki Hirata | Department of Neurological Diagnosis and Restoration, Department of Neurosurgery, Graduate School of Medicine, The University of Osaka (President of the 29th Annual Meeting in 2027) |
| Honorary Members |
Ken-ichi Uemura, Ryusuke Kakigi, Amami Kato, Takamasa Kayama, Mitsuru Kawamura, Iwao Kanno, Toshihiko Kinoshita, Shinya Kuriki, Hideaki Koizumi, Yoshihiko Koga, Tetsuo Kobayashi, Yasuhisa Sakurai, Morihiro Sugishita, Kenji Sugiyama, Katsuhiko Takeda, Shoji Tsuji, Shozo Tobimatsu, Teiji Tominaga, Ken Nagata, Koichi Hirata, Hidenao Fukuyama, Yoko Hoshi, Tomokatsu Hori, Satoru Miyauchi, Etsuro Mori, Eiju Watanabe |